FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTCAGCTCACAGAGTTTAACCTTTCTTTTGATGGAGCAGTTTGGAAA535.714285714285715No Hit
GTCTGTCCTAAAAGAAAGAAAAAGCAGCTATTCATTGTAATGCGAGACTT214.285714285714285No Hit
ACCTAAATATATATGTGTGTGTGTGTGTGTGTATACTATTTTATATTATA214.285714285714285No Hit
GAACTCTACTGAAATACAAAAAATTAGGTTGGTGTGGTGGTGCACACCTG17.142857142857142No Hit
TCTCTCTGTCTCTACCAAAAATACAAAAATTAGCCAGTCTCATAACTGGT17.142857142857142No Hit
TGTCTCTGCTTTGGTAAATCCCTGTGTGCCCACATACACGTCACCCCCAT17.142857142857142No Hit
CTCTAATTGGATGTTTGTATCCTTTAACAGCTCTTCATTAAATTTACAAT17.142857142857142No Hit
GCGTTTTTGGTTGAGATTTATTTTAGTTTCAAGTGATGTAAACATTTCAT17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)