FastQCFastQC Report
Wed 15 Mar 2023
EGAF00007933748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007933748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2408
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GACTATTCTCCACCACCATGCTGTCATCTGGGCAGAAAGAGGTTTTCTCA50.20764119601328906No Hit
ATACTTCTTTTAAATTTGTCTGGTGATTCTAAAGTGTTAAGCTCGAGAAC50.20764119601328906No Hit
TATGTTAATGTTCTATTTCTAATTCTTTTCCACATTGTAAAGTGTTGGTT50.20764119601328906No Hit
ATTCTATAGATTTCTCCTCTCCCTCTCACTGTCACTCTCGCTCTTTTTGT40.16611295681063123No Hit
TGACTAAAGAAAAAGAAAGAAAGAGAAAACAATTTCACTTACAATAGCAT40.16611295681063123No Hit
TCACTTTTATGTTTAACCGCCTGGGAGCACCTATGACTCTTTCCCTAGAC40.16611295681063123No Hit
GGTGTCTTGGACTAAATATAATAGTAAGATAATTACATTGACAGAAACAA40.16611295681063123No Hit
GATCTTAAACAATTTGACCCTTATTTGATTTTTCTAATTTTCATTTTTAT40.16611295681063123No Hit
CGTGTAGTTTGTGAATCTAAAGTTCTACACAAAGGTGGAAATATTTGCAA40.16611295681063123No Hit
TGTCTGGTGCTAACTCCACCTGGAACTGACAGTCCAGCCCCCATGCTTCA40.16611295681063123No Hit
TTGTGCTGATTTTTGTATTTTTAGTAAAGATGGGGTTTCACCGTGTTGGC40.16611295681063123No Hit
TTGTGGCTCACTGCAACCTGTGCCTCCCGGATTCAAGCAATTCTCCTGCC40.16611295681063123No Hit
GTCTCATGAGCACCAGACATCATCTACTGTAGCTGCATGAAAATTCCTGA40.16611295681063123No Hit
TATGTACCCTGTGTCCATGTGTTCTCATCGTTCAGTTCCCACTTATAAGT30.12458471760797342No Hit
CTCTCATTCCATTCCATTCCATTCCATTCCATTCCATTCAATTGTATTCC30.12458471760797342No Hit
CTGTTGAATATTAAGAAGATAATTCCTGTATGTTCAGAACATAATGTTAG30.12458471760797342No Hit
GGCTAATTGGCAAATGGAGATTTCAAGCGCTTTAAGGTCAATGGCAGAAA30.12458471760797342No Hit
CCGTTGAGTGTTTAGTCTTTCATGAAATAGTTACTTAGGAAATAATTCTC30.12458471760797342No Hit
GGGTATTTCCACACACAAATTGTCCTTGAACAATTTCTCCAATACCTGAA30.12458471760797342No Hit
CCTGTATCTAAGCTCCTACTTTTATGTTCAAATACACTGAATAGAGTTCC30.12458471760797342No Hit
CTTCTCCAGCCCTCCCCTCCCAGCCCCCACCTGCCTGGCTCCAGAAGGCC30.12458471760797342No Hit
ATTCTCCGGGCGGGGGGCTGACCCCCCCACCTCCCTCCCGGACCGGGCGG30.12458471760797342No Hit
GTTGTAGTGTAGGTATGATAATTTAAAAATGCGTTGGTTTAAAAAAAACT30.12458471760797342No Hit
TATGTGGCAGGGGTTGCAATCCTAGTCTCTGATAAAACAGACTTTAAACC30.12458471760797342No Hit
ATGTTTCTCTTCTACTGCATACAATTTCACTCCATTCGTTCCCATTCCAT30.12458471760797342No Hit
TTAGTGAACTGATGAGTAACTTATGAAAATTACTGAGTACTTTTTTTTCT30.12458471760797342No Hit
ATTCTATACCATGCTTATTCTGAGCCCTAATCTCACTGAGGGACATAGTG30.12458471760797342No Hit
TTAGTTGCTCTGTTGCCTAGGCAGGAGTACAGTGACATGATCTCGGCTCA30.12458471760797342No Hit
ACCTAACGAAATCTTCACAGCTATCCAAATATCCACTTGCAGATTCTACA30.12458471760797342No Hit
CTCTGTTTTTGTTTTGTTTTGTTTTGTTTTTCTTTGCAACAGTCACAAAC30.12458471760797342No Hit
CCCTACATTACATTCCAGTATATTCCATTGTATTCGATCCCATTCCTTTC30.12458471760797342No Hit
GGCTGCCCACAGAGAAAAGGCCACGTGAGGCCACCACCCAGAAGAGAGGC30.12458471760797342No Hit
GTTGTATGAAGATTCTTGCTTAGTGTCTCCATGCTGTTAAAGGAAGACAA30.12458471760797342No Hit
GGTGTGTAATCTGCAATGCTGGATGCCAGAAGAACAAATAATAAAGAAAC30.12458471760797342No Hit
TATGTTAGCCAAGATTGAAATCTGAGTATCAGGAAACAATATTTAAGATT30.12458471760797342No Hit
CTGTCCTTCTGGGTCTAGTATTTCCTCTAGTGTCTCTTCCAGATCCTTCT30.12458471760797342No Hit
TCTCTAGTTACAAGGTACTGAAAAAAAATCGTGATTCTGCAAGTAATTCC30.12458471760797342No Hit
CCGTGGCTCATTCTCTTTCTCAATCTCAATTTGAAAAGTCTTAGGGAAGA30.12458471760797342No Hit
TACTCTATACCACTGAGTCACAATAACGACAATTCTGCAAGCTTTTGGTT30.12458471760797342No Hit
GCGTGTCAGGAGGAAGGGGAAGGAATAGCTGTTTCTGTCTCTTTTATCAG30.12458471760797342No Hit
GTGTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTTGCTGTGTTGC30.12458471760797342No Hit
TCGTCATTCAGGACATAGGCATGGGCAAGGACTTCATGTCTAAAACACCA30.12458471760797342No Hit
GAACTAAAGCAATCCTATTTCAATAGCTACAAAATAAATAAAATACATAG30.12458471760797342No Hit
TTTGTCTAAGACACAGTGTGGGTACAGGCGTTGGGTAAATGTTCACATTC30.12458471760797342No Hit
AGCTTGATGGGGATGGCATTGAATCTATAAATTACCTTGGGCAATATGGC30.12458471760797342No Hit
AAAGTTTATTTCATGTCTTTGCAAGAACAGCATCGGATCCTACTCTAAAG30.12458471760797342No Hit
GGCTTGTACTCTACCACAATCTCTCTCCACTGGATATTGTGTTAGCTTCC30.12458471760797342No Hit
CGTGTTTTGCTGAAGTTGCCTATCAGCTTAAGGAGATTTTGGGCTGAGAC30.12458471760797342No Hit
TCCTCAAACCCTGATAGAAAGAGGTCATCCCACGTTTCTGTAGTTAGCAC30.12458471760797342No Hit
GGAGTAGGAGTTGACCAATAAGAACACATGGACACATGGCAGGGGTGGAC30.12458471760797342No Hit
ATTCTAATGGCTGTGAATGAACTAAATGTGACTGATTTTTTTTCTTTAAA30.12458471760797342No Hit
CATCTGCTGAATGGCTTAAACAACAGAAATTTATTTTCTCACAGTTCTTG30.12458471760797342No Hit
TAGTCATCCTGGCTAACACAGTGAAACCCCGTCTCTACTAAAAATACAAA30.12458471760797342No Hit
CTCTGCAGCCATCCACATCCTGAGCTAGCTCTGAAAGTCAAACCAGCACA30.12458471760797342No Hit
TGCTAACTAAGTGAATGGCCTGGTGGCAGGAACACAGTTCAGATAGAAAG30.12458471760797342No Hit
TTCTTGTGCATATACATTTAAAAAAGCCAGGGAGGTCCGAGCGCGGTGGC30.12458471760797342No Hit
AATGTGCTCACTGCAACCTCTGCCTCTCCGGTTCAAGCAATTCTCCTGCC30.12458471760797342No Hit
CCCTAAAAAGTTGTATCTAAAAAGACAACAGAAATAAAATTTGATTGTAA30.12458471760797342No Hit
GATCTATGTAAAAGTTCTGGTTGAGGAAATGGAAACAACAACACACACAA30.12458471760797342No Hit
GATCTCCTCCAACTCCCACACTAACTAACCCCTTCCCCACCAAATCTAGC30.12458471760797342No Hit
TTTGTCCAGCTGATTTTTGTATTTGTAGTAGAGACGGGGTTTCACCATGT30.12458471760797342No Hit
TTAGTCACCATTGCACTCCAGCCTTGGCAATAAGAGTGAAACTCCGTCTA30.12458471760797342No Hit
GTTGTAGGATATGTTTGGGAAATAGAAAGAATTAAAGAAGTACAGAATAT30.12458471760797342No Hit
AGACTAACCAGATTCTGGGCCCCAACCCCATGCGTGTATCACCTGCTTTT30.12458471760797342No Hit
GGAGTTGCAAATGTCAGGTATGAGAAAACAGGTTCTAAGACAAATATTTA30.12458471760797342No Hit
GCTCTGTAGAGTGTGAAGTGCATTGGCACAATCCCTGTCCTTGCAGGTAT30.12458471760797342No Hit
GCCTCCAGCTTGAATGCTCTGATTTCTTGATTCTCTTCTCATTCTTTCAT30.12458471760797342No Hit
CTGTAGAAAAATATTGCACATTCTAATTCATATGTGGGAGCTAAATAAGT30.12458471760797342No Hit
CGAGTACAATTATGTGATTTAGCGAAAGCAGTCCTGTCAATTTAGCAATT30.12458471760797342No Hit
TACTCATCTGAGTGGGCACTGCCCAGTGGGCAGCGGGGCAGGGCAGCAAG30.12458471760797342No Hit
GACTGGTGAAACCCCATCTCTACTAAAAATGCAAAAATTAGCTGGGCGTG30.12458471760797342No Hit
CACTAGGGACCACCCCAAAAGGGAGTGAGAAGCAGAAGCTACAGCCAAGG30.12458471760797342No Hit
GGCTGGTTTTCTTCTTAATCATAAACATTAGACACCTGCTGTTCTGTCTG30.12458471760797342No Hit
TTCTAAATCTTTCAAAAAATCGAATGTTTTGAATTACCCAAATTGCCCCT30.12458471760797342No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)