FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007934653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences528632
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10840.20505758259053555No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10690.20222006991631228No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9140.17289910561600508No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7330.13865978601371087No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7120.1346872682697983No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7060.13355226320010896No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5750.10877131917855899No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)