FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007934660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467295
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT32690.6995580949935265No Hit
CGGCGGAACCGGGACAGTAGCCTGCGCGGTGGTCACCGGTGGGG21650.4633047646561594No Hit
ATCGCCCGGAACTACCTGGCTAGTGTGACCGGTCTCGGCAGCGG20290.43420109352764313No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT18570.3973935094533432No Hit
TGGTGCCTGAGACTCGTTCAGTTTCTTAGCTTCGCCCAGGACGT16680.3569479664879787No Hit
GTCACCCGGAACGACCTGGCTGGTGTGGCCAGTTTCTGCTGCGG14820.3171444162680962No Hit
CATGGTGTCGCCCGGCACTACCTGGGAAGTGTGGCCGGTCTCAG14520.3107244888132764No Hit
GGCATCGGTGAAGCCAGTGCCGAATGCGTCACCCAGACCTTTGA14010.2998106121400828No Hit
GGACTGGTCCGGCAGGGTATCCGGGAAAGCCGCACGTGCCGCAC12920.27648487572090436No Hit
CATGGTGTCACCCGGGACAACCTGGCTGGTGTGACCAGTCTCAG12750.2728469168298398No Hit
GCTCAGCTGAGACGGCTGCATGTTTTTGCCGGCCAGGTGTGCTT11650.24930718282883402No Hit
ACCCTGACCACGCGGACCGGTGGAAGGACCTTCGCCCGGATCAT10660.22812142222792883No Hit
AGAGGACGGACGGCTACCCTGTTTGCCGTTCCAGTAGGCCTGTG9790.2095036326089515No Hit
TGGGATCTGCAGAGTCTGGTTCGGCATGATCAGATAACCACGCA9010.19281182122642013No Hit
TGCACGTTCCGGAGACGGGTTACGGGTGCGTTTGTTAGACGGCG8610.18425191795332713No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG8520.18232593971688119No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCAGAG8490.18168394697139922No Hit
TTCCGCTTTCGGTTTACGCGGGGCGCGTTTGCGTGGAGTTTTTG8470.1812559518077446No Hit
GGCTGGAATGGATTCGGAGTTGCGCGGGCCGGTCGGCAGGGTGT7970.1705560727163783No Hit
GGCGATCAGGTCGGACAGGTTTTTCTTGATAACTTCGCCAGACG7840.1677741041526231No Hit
GATGGTGGATTCGCTACGGGAACGGCGCTGCACAACGTGACGGG7130.15258027584288297No Hit
GCCCGGCAGAACATCGGAGGCGTTACGGTAGTGCTGACCTACGC6970.14915631453364578No Hit
GCGAATGTATGCCAGCCACGCTTCGTCTTCAGCCAGGATATCGC6460.13824243786045218No Hit
GCCCTGACCGCGCGGGCCGGTGGACGGACCCTCACCCGGGTCGT6200.13267850073294174No Hit
GTCGGTGCAGTTCAGACAAGTTGGGCACAGTTTACCACGAGTTT6090.13032452733284114No Hit
GATGGTGGATTCGGAACGGCTACGACGCTGAACGACGTGGCGGG6080.1301105297510138No Hit
CTGGGAGGTCAGGAACACCAGGTAGCTGCGCTGAGCTTCACGGA6080.1301105297510138No Hit
GTCGCCCGGTACTACCTGGGAGGTGTGGCCAGTTTCAGCAGCGG5900.12625857327812195No Hit
GGCGCCCGCGGTTCAACCAATGGTAACACAAGAACTGAGCCTTC5840.12497458778715802No Hit
CACGCTAGATACCATCTGGCAGAACATGGAGATGTCCTGGCCAT5800.12411859745984871No Hit
CATGGTATCACCTGGAACAACCTGGCTAGTGTGGCCGGTTTCAG5690.12176462405974814No Hit
CACGTGACGGGTTTGGACCGTGTCAGACGGTGCCAGCGGGTTGG5410.11577269176858301No Hit
CGGTTCGCCGTCCGGGCCACCTTCCTGGTGATATTCAAAGTAAT5310.11363271595030977No Hit
TTCCTGGTGATATTCAAAGTAGTCTGCTTCACCGACCGGGTGGA5300.11341871836848244No Hit
GTTGCGTGGGCCGGTCGGCAGGGTATCTGCTACACGAGCTACCG5240.11213473287751848No Hit
AACGTGACGGGTCTGAACGGTGTCAGACGGGGCCAGCGGGTTGG5050.10806877882279929No Hit
AGAACTGAGCCTTCACTGGTTCAGCTCCCTCGGTCGAGTACGCT4970.10635679816818071No Hit
CGGACGAGTCGGCAGGGTAGCACCGGTTTCGTTCGCGGTCAGTG4930.1055008078408714No Hit
GTCAGACGGACGAGTTGGCAGGGTTGCGCCGGTTTCGTTTGCGG4850.10378882718625279No Hit
ACGCGGGCGTTCCGGGGTTGCGCCAACCAGACGGGAGCAGTCCG4790.10250484169528884No Hit
AACGCCGCGCAGGTCTGCTTCACCACCTTCGCCTTCGTCCTGGT4680.10015086829518827No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)