FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007934675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences454597
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT23850.5246405057666461No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT18760.41267320285879583No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17930.3944152733080069No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17830.39221552275971905No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA10770.23691313405059866No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA10360.2278941568026186No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9190.20215707538765107No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA8200.18037954495960157No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA7540.16586119134090194No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA7360.16190164035398386No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA7190.15816206442189454No Hit
GTGGGCGGCTCTGATGCACAGAACACCTCTA6630.14584346135148274No Hit
TCCTACACCAACGGCAAACTGACTATCACCC6210.13660450904867388No Hit
CAGGGCCGTTATACTACCAACGACGGTTACG5620.12362598081377572No Hit
CTGACTTCTATTACTCTGGGCGGTACCACCA5350.1176866543333986No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5260.11570687883993955No Hit
ACCGCCACCGTTAAAGCATATGGCGGCGAAG5000.10998752741439122No Hit
GCGCAGGGTCGCTACACTACCGACGACGGCT4950.1088876521402473No Hit
CCGAAACGTCTGAACCTGTACATCGATGGTG4840.10646792653713069No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC4630.10184845038572626No Hit

[OK]Adapter Content

Adapter graph