FastQCFastQC Report
Sun 21 May 2023
EGAF00007934703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences394404
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT36920.936095982799363No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19580.4964452693177554No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11200.28397277918073854No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6240.15821340554355434No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA5380.1364083528564619No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4770.1209419782760824No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG4600.1166316771635176No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA4210.10674333931704548No Hit
ACCGCGTCCGGTGAAGAAGTAGCAGTTCTGA3970.10065820833460107No Hit

[OK]Adapter Content

Adapter graph