FastQCFastQC Report
Wed 31 May 2023
EGAF00007934705

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934705
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences361160
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG53441.4796765976298594No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT33400.924797873518662No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10230.2832539594639495No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5940.16447004097906745No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4490.12432163030235907No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG4310.11933768966662975No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG3810.10549341012293721No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA3710.10272455421419868No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)