FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007934733

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934733
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences544666
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44030.8083853223810555No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT41470.761384040861739No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT17880.32827457561147566No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17210.31597345896384205No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA8880.16303569527012884No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG7660.14063664704607962No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6990.128335530398446No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6630.12172597518479214No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6230.11438202494739895No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5890.10813966724561475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)