FastQCFastQC Report
Sun 21 May 2023
EGAF00007934735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences552652
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT45540.8240266931088641No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44750.8097319832371908No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT18740.33909223163944036No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA17290.3128551059256096No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9190.1662890933173136No Hit
TCTGCGTCCGCCTCCGTTCTGTCTCCGACCG8340.15090870927817143No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC7120.12883333453963797No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6570.11888132133784009No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG6180.11182443924929251No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5960.10784363396857334No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)