FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007934767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences493217
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41750.8464833937191946No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16030.32500907308547755No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9500.19261298779239158No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7270.14739962328954598No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6240.12651632040258143No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6000.1216503080794052No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5370.10887702573106767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)