FastQCFastQC Report
Wed 31 May 2023
EGAF00007934769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences498893
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41100.8238239462169243No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16980.34035354274363444No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9420.18881804314752862No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT7580.15193638716117483No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6310.12648002677928935No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6010.1204667133032534No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5370.10763831122104339No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)