FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007934789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527152
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG44240.8392266367195799No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22090.4190442225392297No Hit
ATGTCCAACATGGACATCGATGGTATTAACA9560.18135186815188029No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG8230.15612195344037394No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7710.14625762588399552No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7560.14341214678119404No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG7270.13791088718244454No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7230.1371520927550308No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6080.11533675296688621No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)