FastQCFastQC Report
Wed 31 May 2023
EGAF00007934811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences559720
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10110.18062602729936397No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA9950.1777674551561495No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9110.16275995140427357No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT7860.14042735653541058No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG7100.12684913885514185No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC6730.12023869077395839No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6270.11202029586221682No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5910.10558850853998426No Hit
GCGAACGAAGCAGGCCAGGTGGCCGGCGGTG5860.10469520474522975No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)