FastQCFastQC Report
Wed 31 May 2023
EGAF00007934833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences428870
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22600.526966213537902No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG22290.5197379159185768No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG12660.29519434793760346No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12560.2928626390281437No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6000.13990253456758459No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA4510.1051600718166344No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)