FastQCFastQC Report
Sun 21 May 2023
EGAF00007934835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences412470
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG59361.4391349673915679No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT22580.5474337527577763No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG11860.28753606322884084No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11640.2822023419885083No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5710.13843431037408782No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)