FastQCFastQC Report
Wed 31 May 2023
EGAF00007934837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences411921
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA28620.694793419126483No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14930.3624481393276866No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA13930.3381716397076138No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA11160.2709257357600122No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7770.18862840204796552No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG7060.17139208731771383No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG6550.1590110725114767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)