FastQCFastQC Report
Fri 21 Apr 2023
EGAF00007934851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences415592
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG61651.4834260524745422No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT14210.3419218849256001No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6470.15568153381200792No Hit
TCCTACACCAACGGCAAACTGACTATCACCC5810.13980057363953108No Hit
CCGAAACGTCTGAACCTGTACATCGATGGTG5010.12055092494561975No Hit
GACAACATCCGCGTCTATGAAGAAAACGGTA4770.11477603033744634No Hit
CAGGCCCCGAAAGCTGACGCGCAACAGAACA4670.11236982425070743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)