FastQCFastQC Report
Sun 21 May 2023
EGAF00007934895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences497572
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG45120.9068034374924634No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT27680.5563013995964403No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11180.2246910999815102No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10060.20218179479552706No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG7320.14711438746553263No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6510.13083533639352696No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6130.12319825070542555No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5630.11314945374739735No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC5510.11073774247747059No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5350.10752212745090156No Hit
CCGGATCCGGCTGTTGCCCCGACCAGCGCGG5320.10691919963341989No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC5050.10149284927608467No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)