FastQCFastQC Report
Wed 31 May 2023
EGAF00007934917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530725
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11170.2104668142635075No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10300.19407414385981442No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9880.1861604409063074No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6940.13076452023175844No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6940.13076452023175844No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5620.10589288237787932No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)