FastQCFastQC Report
Sun 21 May 2023
EGAF00007934919

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934919
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512730
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG47660.9295340627620776No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT10380.20244573167164004No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9140.17826146314824567No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6840.1334035457258206No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5970.11643555087472938No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5260.10258810680085036No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5160.10063776256509274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)