FastQCFastQC Report
Sun 21 May 2023
EGAF00007934923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488919
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9120.18653396574892775No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8240.16853507431701364No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5930.12128798430823919No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5710.11678826145026068No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5610.11474293287845226No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5490.11228853859228216No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)