FastQCFastQC Report
Wed 31 May 2023
EGAF00007934925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492228
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10260.2084399912235793No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC8570.17410630845868175No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG6270.12737999463663183No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6030.12250420536824398No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG5800.11783157398603898No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA5690.1155968372380279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)