FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007934961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences476768
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA12300.2579871132290758No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG9650.20240452379354318No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8840.18541512853211625No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG7830.16423082086046042No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA4960.10403382777367609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)