FastQCFastQC Report
Wed 31 May 2023
EGAF00007934969

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007934969
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences477510
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG43770.9166300182195138No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT13770.28837092416912735No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8560.1792632615023769No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6430.13465686582479947No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5970.12502355971602688No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)