FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences474713
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT39750.8373480397629726No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12040.2536269282703444No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9580.2018061439227491No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG8560.18031947724203887No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5760.12133647066754018No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5380.11333163406100108No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4750.10006045758173886No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)