FastQCFastQC Report
Wed 31 May 2023
EGAF00007935005

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935005
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460131
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG41210.8956145097809102No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT39870.8664923684776726No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11130.2418876363470403No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC9940.21602543623446369No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA5290.11496725932397511No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT5190.11279396519686787No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA4730.10279681221217436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)