FastQCFastQC Report
Sun 21 May 2023
EGAF00007935024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences463616
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT19210.41435153230259525No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTAGAA14880.3209552733296521No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAGAAA12730.2745806874654887No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATATAGT8590.18528264770844838No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGGCGG7030.1516341109884042No Hit
GTTCTGGGACGCAGCCATGTAGTCCTGCGGTGCCGCACGACGCT6910.14904576200993924No Hit
GTTGCGCGGCGGACGAGTACGTACCGGAACGCGCAGACCGCTCA6270.13524123412479294No Hit
AGACGCTAGATGAGGAGCGTACGGAGCTGAACACAGATTTAAAT5150.11108331032578685No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)