FastQCFastQC Report
Sun 21 May 2023
EGAF00007935027

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935027
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences475112
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT30630.6446900941251746No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT20910.4401067537759518No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG12980.27319874050750137No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA9240.194480459344323No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG7290.15343750526191718No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC7020.147754634696661No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCC6390.13449460337772987No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG6140.12923268618767786No Hit
ACCGCATCCGGTGAAGAAGTTGCGGTACTGA5980.12586505918604454No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5460.11492027143073633No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)