FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935035

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935035
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453155
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG30840.6805618386644746No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC11570.25532102702165926No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT7030.1551345566086659No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6770.14939700543963988No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5120.11298562302082069No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT4810.10614469662698194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)