FastQCFastQC Report
Wed 31 May 2023
EGAF00007935051

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935051
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences483155
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG6190.12811623599052063No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5550.11486996926452174No Hit
GTGAACGCAAAAATTGATCGCCTGAACCAGATC5250.10866078173670975No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5100.10555618797280376No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT4920.10183067545611656No Hit
GAACCGATCTACGCTACCATCGACGACCTGGGT4840.1001748921153667No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)