FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences467712
Sequences flagged as poor quality0
Sequence length33
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG39310.8404744800218938No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21330.45604987684729065No Hit
ATCGAAGTGATTGACGTTGAAACCACTGAAGAT20810.44493192391899283No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT17110.3658234126984127No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTGAG16670.35641591406677614No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT16230.3470084154351396No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGTTC10660.227918035030104No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC10590.22642138752052543No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCGGT10150.2170138888888889No Hit
GGCCGTCGTCCTTTTTTCCACCCGGTTGGCGAA9810.20974445812807882No Hit
ACCGAACCTACTACTGATTACGGCGGTGACTCC9020.19285372194854955No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTATC7430.15885844280240832No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTCGC7250.15500992063492064No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGATG7080.15137520525451562No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCGGT6640.14196770662287903No Hit
CCGGTAGGCGAGGCGGACTATTTCGAATACCAC6360.13598111658456485No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCATT6230.13320162835249041No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT6160.13170498084291188No Hit
GGCCGTCGTCCGTTCTTCCACCCGGTTGGTGAA6050.12935310618500273No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGCTG5480.11716611932129173No Hit
GCTGGTATCGTGACCGTCCCGCCACGCTCCCGT5470.11695231253420908No Hit
GGTTCCCGTGAACGCGCACGTGGTCGTGGCCGC4870.10412390530925013No Hit

[OK]Adapter Content

Adapter graph