FastQCFastQC Report
Wed 31 May 2023
EGAF00007935071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences576952
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG18480.3203039420957029No Hit
GCCGTCGCGAACAGCAACAACGACACCGCTAAA8710.15096576491631886No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7940.13761976732899792No Hit
CTGTCCTCCATGGCTATCACCTTCAAACGCGCG7920.13727311804101555No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG7150.12392712045369458No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7020.12167390008180923No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT6750.11699413469404733No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6670.11560753754211789No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTGGC6570.11387429110220608No Hit
CCGGATTTTGAACAGAACATTGCGACCACCACC6180.10711462998655001No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)