FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935074

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935074
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences453473
Sequences flagged as poor quality0
Sequence length41
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGT7950.17531363499039634No Hit
CAAAGTGTCGGCACGTACGATGTAATCGCGTTTCCCCAGTA6890.1519384836583435No Hit
ATCGGTGCAGGATTGCGTAATTTAGTAGCGCCGTCCGTAAG6020.13275321794241332No Hit
GTCGCTTGGACGAGTCGGCAGGGTTGCGCCGGTTTCGTTGG5620.12393240611899717No Hit
CGGACGCGTTGGCAGGGTCGCGCCAGTTTCGTTTGCAGTCA4890.10783442454126266No Hit
TGCCGCCAGTTCAGATGCGCTCAGATCGGATTTCGGGATAT4850.10695234335892102No Hit

[OK]Adapter Content

Adapter graph