FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440986
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20340.46123913230805513No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG15560.3528456685699773No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT7610.1725678366206637No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC7420.16825930981935935No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5930.13447138911439366No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5790.1312966851555378No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT5300.12018522129954239No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACGTT4820.10930052201203666No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT4810.10907375744354696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)