FastQCFastQC Report
Sun 21 May 2023
EGAF00007935087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences465718
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG37270.8002696911006231No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTCGT7530.16168582704555115No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAGAA6950.14923193864098017No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT6320.13570443916704958No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5490.11788249541568073No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCAGC5370.11530582884921776No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5300.11380277335211438No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)