FastQCFastQC Report
Sun 21 May 2023
EGAF00007935091

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935091
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences553756
Sequences flagged as poor quality0
Sequence length33
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG43080.7779599679281127No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC14150.2555277053431475No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT9740.17588974205245633No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT7280.1314658441624109No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG6240.11268500928206648No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)