FastQCFastQC Report
Sun 21 May 2023
EGAF00007935093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences555834
Sequences flagged as poor quality0
Sequence length33
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG45660.821468280098015No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC14510.26104916215992546No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACACT10500.18890532065328858No Hit
CAGGGCCGTTATACTACCAACGACGGTTACGTT6860.12341814282681521No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5920.10650661888261603No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)