FastQCFastQC Report
Wed 31 May 2023
EGAF00007935095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449208
Sequences flagged as poor quality0
Sequence length33
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21550.4797332193549536No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTATT8070.17964951648234226No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACTGG7720.17185802568075367No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAACTG5540.123328168688002No Hit
CGTGAAGCCATTAAGGATACCACTTCCGACTAC5430.12087941443607415No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTGAC5280.1175402040925362No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCTAC5120.1139783797260957No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCGAT4820.10729995903901979No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)