FastQCFastQC Report
Sun 21 May 2023
EGAF00007935113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences568542
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTCGCCACACCCAGAAAGCACCGAAACGTA22740.39997045073187204No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19420.34157546847902176No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC16180.2845875942322643No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14420.25363121809822314No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG10410.18309992929282268No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10220.17975804777835236No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA10020.1762402777631204No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9070.15953087019076867No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8670.15249533016030478No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA8480.14915344864583444No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6300.11080975547980625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)