FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935121

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935121
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences517733
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG76781.4830037876666158No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15130.2922355731622284No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14250.27523839508008957No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC6890.13308017839310995No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6800.1313418306347094No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5910.11415150280163713No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5220.1008241699872328No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)