FastQCFastQC Report
Wed 31 May 2023
EGAF00007935137

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935137
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472774
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG77261.6341846209816953No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA6870.14531255948931202No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5510.11654617216682814No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT5150.10893154022852357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)