FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences523519
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28740.5489772099961988No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT12640.24144300397884316No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT5720.10926059990181829No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC5310.10142898347528934No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)