FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935151

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935151
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences460943
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG75871.6459735802474493No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT13910.30177267037356026No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT8870.192431602172069No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC8470.18375373961639507No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC8210.17811312895520706No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC8010.1737741976773701No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC7980.17312335798569453No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG5540.12018839639608368No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5410.11736809106548966No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5060.10977496132927497No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA4620.10022931251803369No Hit
GCGCCGGTTTGCCGTAACTCCCACACCGCCA4610.10001236595414184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)