FastQCFastQC Report
Wed 31 May 2023
EGAF00007935153

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935153
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences502134
Sequences flagged as poor quality0
Sequence length31
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG18160.3616564502702466No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT15320.3050978424086001No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT10500.2091075290659465No Hit
GGTTACCAGGAACCGCCGGCACCACAGGCGC9630.19178147665762524No Hit
TCTCACGAAGAACAGCCGCGTTACGAAGATC9060.18042992507975958No Hit
GGCTACCAGGAACCACCGGCACCACAAGCCC8920.17764182469221362No Hit
TCTCACGAAGAACAACCGCGTTATGAGGATC8060.1605149223115742No Hit
CGTAAAGCTAAACCGGCAACTAAGCCGGCAG6040.12028661671983971No Hit
GACGCACTGACGGAAGGTCTGTCCGATGAAC5990.11929086658143047No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA5730.11411296586170225No Hit
CAGACCGATGCCCTGACCGAAGGTCTGTCTG5330.1061469647544281No Hit
CAGACCGACGCCCTGACTGAAGGTCTGTCCG5040.10037161395165435No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)