FastQCFastQC Report
Wed 31 May 2023
EGAF00007935169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences472043
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28110.5954965967083508No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16180.3427653836620816No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA14560.30844647627440724No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA8370.17731435483631786No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6410.13579271379937843No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA5650.11969248564219785No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)