FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494965
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG68081.3754507894497592No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA16400.331336559150647No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG13510.27294859232470986No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT12070.24385562615538472No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT11770.23779459153677532No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC10950.22122776357924298No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT6930.14000989968987707No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6200.12526138211792753No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGTA6120.12364510621963168No Hit
GCACGTCGTCAGGAAGCAGAACGCCAGGCCG5950.12021051993575302No Hit
CGTCGTCATACCCAGAAAGCACCGAAACGCA5660.11435151980443062No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)