FastQCFastQC Report
Sat 22 Apr 2023
EGAF00007935174

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935174
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences430107
Sequences flagged as poor quality0
Sequence length44
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTCAGGGACGGTACGCCGACACGAGAACCGCGACCTTTAACTG11490.2671428272499634No Hit
GGTAGAAGCGGCGCGGGAGCTACCAGACAGGCGACCCGGTGCGG9770.22715277826215338No Hit
GGCCAGTTCGGAAGCGGACAGGTCGCTTTTCGGGATATAGTGAT6940.16135519766011713No Hit
TACACCGACACGGGAACCGCGACCTTTAACCGGGGATGGCGGAG6430.14949768313466183No Hit
CGGACCTTCGCCCGGGTCATCTGCCGGGCCCTGTTCGATGGCAC4980.11578514183679875No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)