FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935187

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935187
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449392
Sequences flagged as poor quality0
Sequence length31
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG63611.4154680101114394No Hit
ATGACCCAGGGTCGTCGTGGTAACGTTTACT14900.3315590842738633No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC11600.2581265354078399No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT7110.15821376437497775No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG6850.1524281696158365No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT6690.14886780361021112No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA6300.14018941147149927No Hit
GAGCGTGCCCGTGGCCGCGGCCGCGGTCGCG5150.11459928080606686No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)