FastQCFastQC Report
Wed 31 May 2023
EGAF00007935197

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935197
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences456602
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGACCCAGGGTCGTCGTGGTAACGTTTACT16890.3699063955041809No Hit
TCTCCACCGCGTCGCCCGCCGCCGGGTCGTC15140.3315798003512906No Hit
ATCCAGGGCAAACTGGAATACCGTCACACCT13580.2974143783864285No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT11520.2522985006635976No Hit
TCTGCCGCCCACTTTCTGCCGCAACAGCCGA11190.2450711998633383No Hit
GGCCGTCGCCCGTTCTTCCACCCGGTAGGTG11090.2428811087117446No Hit
CCGCGTCGCCCGCCGCCGGGCCGTCGTCCGT10890.2385009264085571No Hit
CGTGGTGAAAAACGTCCGCGTTCCCCGTCCA8350.1828726111580764No Hit
CGTCGCCACACCCAGAAAGCACCGAAACGTA7170.1570295355692704No Hit
GGCGAGTTCCGCCTGCACAACCCGATCAAAG6910.1513352985751267No Hit
GTAGCTGTTGCTCGCTCCCAGGGTCGTTACA6160.13490961493817372No Hit
GGTAGCCGTGAACGCGCACGTGGTCGTGGTC6100.13359556024721747No Hit
TCCGCGCCGCCGTCCCCTGTCAAAGGTCGTG5980.130967450865305No Hit
CGTGAACGCCAGAAACGTGTTGACGATGAGG5800.1270252867924363No Hit
GGTCGTCAGGGCAGCGACGTAGAACTGGAAT5650.1237401500650457No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG5470.11979798599217699No Hit
GGTCGTCAGGGCTCCGATGTCGAACTGGAAT5380.11782690395574263No Hit
GAGCGTGCCCGTGGCCGTGGTCGCGGCCGCG5080.11125663050096145No Hit
GTGGCACAGTCCCAGTACTTCGACCTGCCGC4840.10600041173713651No Hit
ATTGAACAGAAACAGCTGCTGCAGGGTGACG4820.10556239350681774No Hit

[OK]Adapter Content

Adapter graph