FastQCFastQC Report
Wed 19 Apr 2023
EGAF00007935205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007935205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440951
Sequences flagged as poor quality0
Sequence length31
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG19730.4474420060278807No Hit
GCTGTTGCAGCGGCGCGTGCACAGGGCCGCT9680.21952552551190496No Hit
CGTTCCTACGACGCCGATGACCGCCTGACCG5740.13017319384693538No Hit
ACCGAACCTACTACTGATTACGGCGGTGACT4480.10159859031955933No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)